PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.WNQ8E
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 319aa    MW: 34986.3 Da    PI: 5.2117
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.WNQ8EgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.53.8e-06162210455
                  HHHHHHHH.HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErr.RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  + +erE++ RR++iN ++  L+el+P +    +k    a +L + +++++sLq
  Aradu.WNQ8E 162 KRKEREKKaRREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQSLQ 210
                  457888766******************9....888999999999999999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.75E-12155228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.40E-8156214No hitNo description
Gene3DG3DSA:4.10.280.103.8E-11157227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.084159209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.1E-7164215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MEQATGVLRG STHDDVVLES IQFNEEIRGI MAPAPAPENA SSFTALLELP PTQAVELLHS  60
PDCPAADREP PCHVSTNQKP YLLCSYGGNL TFPSNAALIE RAAKFSVFAG ENSPPEDAAR  120
LAPVAVSGVV KNEPQETDSN PSSTQGCVSD PAVDTKNQKT AKRKEREKKA RREKINARMK  180
LLQELVPGCN KISGTALVLD EIINHVQSLQ RQVEFLSMKL AAVNPRIDFS LDSLLATDGS  240
SVMDSNLTSM ASPVMWPENL ANGNRQHFQQ HWQFDAFHQP LWGREEANHN FMTPEHSLLS  300
YDSSANSASL QSNQLKMEL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015969486.10.0PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH48
SwissprotQ8VZ024e-75BH048_ARATH; Transcription factor bHLH48
TrEMBLV7CVR71e-178V7CVR7_PHAVU; Uncharacterized protein
STRINGGLYMA03G29710.11e-168(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49852945
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42300.12e-63bHLH family protein